DOI: 10.18129/B9.bioc.Heatplus    

This is the development version of Heatplus; for the stable release version, see Heatplus.

Heatmaps with row and/or column covariates and colored clusters

Bioconductor version: Development (3.7)

Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.

Author: Alexander Ploner <Alexander.Ploner at ki.se>

Maintainer: Alexander Ploner <Alexander.Ploner at ki.se>

Citation (from within R, enter citation("Heatplus")):


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PDF R Script Annotated and regular heatmaps
PDF R Script Commented package source
PDF R Script Old functions (deprecated)
PDF   Reference Manual
Text   NEWS


biocViews Microarray, Software, Visualization
Version 2.25.0
In Bioconductor since BioC 1.8 (R-2.3) (12 years)
License GPL (>= 2)
Imports graphics, grDevices, stats, RColorBrewer
Suggests Biobase, hgu95av2.db, limma
URL https://github.com/alexploner/Heatplus
BugReports https://github.com/alexploner/Heatplus/issues
Depends On Me GeneAnswers, phenoTest, tRanslatome
Imports Me
Suggests Me mtbls2, RforProteomics
Build Report  

Package Archives

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Source Package Heatplus_2.25.0.tar.gz
Windows Binary Heatplus_2.25.0.zip
Mac OS X 10.11 (El Capitan) Heatplus_2.25.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Heatplus
Package Short Url http://bioconductor.org/packages/Heatplus/
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