To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Vvinifera.URGI.IGGP8X")

In most cases, you don't need to download the package archive at all.

BSgenome.Vvinifera.URGI.IGGP8X

DOI: 10.18129/B9.bioc.BSgenome.Vvinifera.URGI.IGGP8X    

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (IGGP version 8X)

Bioconductor version: Release (3.6)

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (derived from Pinot Noir and close to homozygosity after 6-9 rounds of selfing) as assembled by the IGGP (version 8X) and available at the URGI (INRA). More details in Jaillon et al (Nature, 2007).

Author: Timothee Flutre [cre,aut]

Maintainer: Timothee Flutre <timothee.flutre at supagro.inra.fr>

Citation (from within R, enter citation("BSgenome.Vvinifera.URGI.IGGP8X")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Vvinifera.URGI.IGGP8X")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Vitis_vinifera
Version 0.1
License CC0
Depends BSgenome(>= 1.38.0)
Imports BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Vvinifera.URGI.IGGP8X_0.1.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/BSgenome.Vvinifera.URGI.IGGP8X/
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