bettr

A Better Way To Explore What Is Best


Bioconductor version: Release (3.19)

bettr provides a set of interactive visualization methods to explore the results of a benchmarking study, where typically more than a single performance measures are computed. The user can weight the performance measures according to their preferences. Performance measures can also be grouped and aggregated according to additional annotations.

Author: Federico Marini [aut] , Charlotte Soneson [aut, cre]

Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>

Citation (from within R, enter citation("bettr")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("bettr")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("bettr")
bettr HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews GUI, ShinyApps, Software, Visualization
Version 1.0.0
In Bioconductor since BioC 3.19 (R-4.4) (< 6 months)
License MIT + file LICENSE
Depends R (>= 4.4.0)
Imports dplyr (>= 1.0), tidyr, ggplot2 (>= 3.4.1), shiny (>= 1.6), tibble, ComplexHeatmap, bslib, rlang, circlize, stats, grid, methods, cowplot, Hmisc, sortable, shinyjqui, grDevices, scales, DT, SummarizedExperiment, S4Vectors
System Requirements
URL https://github.com/federicomarini/bettr
Bug Reports https://github.com/federicomarini/bettr/issues
See More
Suggests knitr, rmarkdown, testthat (>= 3.0.0), BiocStyle
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package bettr_1.0.0.tar.gz
Windows Binary bettr_1.0.0.zip
macOS Binary (x86_64) bettr_1.0.0.tgz
macOS Binary (arm64) bettr_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/bettr
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/bettr
Bioc Package Browser https://code.bioconductor.org/browse/bettr/
Package Short Url https://bioconductor.org/packages/bettr/
Package Downloads Report Download Stats