microbiomeDASim
Microbiome Differential Abundance Simulation
Bioconductor version: 3.24 · Package version: 1.27.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
A toolkit for simulating differential microbiome data designed for longitudinal analyses. Several functional forms may be specified for the mean trend. Observations are drawn from a multivariate normal model. The objective of this package is to be able to simulate data in order to accurately compare different longitudinal methods for differential abundance.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("microbiomeDASim")Details
| Maintainer | Justin Williams <williazo@ucla.edu> |
| Author | Justin Williams, Hector Corrada Bravo, Jennifer Tom, Joseph Nathaniel Paulson |
| License | MIT + file LICENSE |
| URL | https://github.com/williazo/microbiomeDASim |
| Bug Reports | https://github.com/williazo/microbiomeDASim/issues |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Microbiome, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/microbiomeDASim/ |
Citation
From within R, enter citation("microbiomeDASim"):
Justin Williams, Hector Corrada Bravo, Jennifer Tom, Joseph Nathaniel Paulson. microbiomeDASim: Microbiome Differential Abundance Simulation. doi:10.18129/B9.bioc.microbiomeDASim, R package version 1.27.0, https://bioconductor.org/packages/microbiomeDASim.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | microbiomeDASim_1.27.0.tar.gz |
| Windows binary (x86_64) | microbiomeDASim_1.27.0.zip |
| macOS binary (arm64) | microbiomeDASim_1.27.0.tgz |
| macOS binary (x86_64) | microbiomeDASim_1.27.0.tgz |