BaseSpaceR
R SDK for BaseSpace RESTful API
Bioconductor version: Release (3.19)
A rich R interface to Illumina's BaseSpace cloud computing environment, enabling the fast development of data analysis and visualisation tools.
Author: Adrian Alexa
Maintainer: Jared O'Connell <joconnell at illumina.com>
Citation (from within R, enter
citation("BaseSpaceR")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BaseSpaceR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BaseSpaceR")
BaseSpaceR | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | ConnectTools, DataImport, DataRepresentation, Genetics, HighThroughputSequencing, Infrastructure, Sequencing, Software |
Version | 1.48.0 |
In Bioconductor since | BioC 2.12 (R-3.0) (11.5 years) |
License | Apache License 2.0 |
Depends | R (>= 2.15.0), RCurl, RJSONIO |
Imports | methods |
System Requirements | |
URL |
See More
Suggests | RUnit, IRanges, Rsamtools |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | BaseSpaceR_1.48.0.tar.gz |
Windows Binary | BaseSpaceR_1.48.0.zip |
macOS Binary (x86_64) | BaseSpaceR_1.48.0.tgz |
macOS Binary (arm64) | BaseSpaceR_1.48.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/BaseSpaceR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BaseSpaceR |
Bioc Package Browser | https://code.bioconductor.org/browse/BaseSpaceR/ |
Package Short Url | https://bioconductor.org/packages/BaseSpaceR/ |
Package Downloads Report | Download Stats |