OpenStats
A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association
Bioconductor version: Release (3.20)
Package contains several methods for statistical analysis of genotype to phenotype association in high-throughput screening pipelines.
Author: Hamed Haseli Mashhadi
Maintainer: Marina Kan <marinak at ebi.ac.uk>
Citation (from within R, enter
citation("OpenStats")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("OpenStats")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("OpenStats")
OpenStats | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | BatchEffect, Bayesian, Software, StatisticalMethod |
Version | 1.18.0 |
In Bioconductor since | BioC 3.11 (R-4.0) (4.5 years) |
License | GPL (>= 2) |
Depends | nlme |
Imports | MASS, jsonlite, Hmisc, methods, knitr, AICcmodavg, car, rlist, summarytools, graphics, stats, utils |
System Requirements | |
URL | https://git.io/Jv5w0 |
Bug Reports | https://git.io/Jv5wg |
See More
Suggests | rmarkdown |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | OpenStats_1.18.0.tar.gz |
Windows Binary (x86_64) | OpenStats_1.18.0.zip (64-bit only) |
macOS Binary (x86_64) | OpenStats_1.18.0.tgz |
macOS Binary (arm64) | OpenStats_1.17.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/OpenStats |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/OpenStats |
Bioc Package Browser | https://code.bioconductor.org/browse/OpenStats/ |
Package Short Url | https://bioconductor.org/packages/OpenStats/ |
Package Downloads Report | Download Stats |