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This is the development version of epivizr; for the stable release version, see epivizr.

R Interface to epiviz web app

Bioconductor version: Development (3.4)

This package provides connections to the epiviz web app ( for interactive visualization of genomic data. Objects in R/bioc interactive sessions can be displayed in genome browser tracks or plots to be explored by navigation through genomic regions. Fundamental Bioconductor data structures are supported (e.g., GenomicRanges and RangedSummarizedExperiment objects), while providing an easy mechanism to support other data structures (through package epivizrData). Visualizations (using d3.js) can be easily added to the web app as well.

Author: Hector Corrada Bravo, Florin Chelaru, Llewellyn Smith, Naomi Goldstein, Jayaram Kancherla, Morgan Walter

Maintainer: Hector Corrada Bravo <hcorrada at>

Citation (from within R, enter citation("epivizr")):


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HTML R Script Introduction to epivizr: interactive visualization for genomic data
PDF   Reference Manual
Text   NEWS
Video   Epiviz quick tour


biocViews GUI, Infrastructure, Software, Visualization
Version 2.3.9
In Bioconductor since BioC 2.13 (R-3.0) (3 years)
License Artistic-2.0
Depends R (>= 3.2.3), methods
Imports epivizrServer(>= 1.1.1), epivizrData(>= 1.1.1), GenomicRanges, S4Vectors, IRanges
Suggests testthat, roxygen2, knitr, Biobase, SummarizedExperiment, antiProfilesData, hgu133plus2.db, Mus.musculus, BiocStyle
Depends On Me epivizrStandalone
Imports Me
Suggests Me
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