keggorthology

graph support for KO, KEGG Orthology

Bioconductor version: Development (3.0)

graphical representation of the Feb 2010 KEGG Orthology. The KEGG orthology is a set of pathway IDs that are not to be confused with the KEGG ortholog IDs.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("keggorthology")

To cite this package in a publication, start R and enter:

    citation("keggorthology")

Documentation

PDF R Script keggorthology overview
PDF   Reference Manual

Details

biocViews GraphAndNetwork, Pathways, Software, Visualization
Version 2.17.0
In Bioconductor since BioC 2.6 (R-2.11)
License Artistic-2.0
Depends R (>= 2.5.0), stats, graph, hgu95av2.db
Imports AnnotationDbi, graph, DBI, graph, grDevices, methods, stats, tools, utils
Suggests RBGL, ALL
System Requirements
URL
Depends On Me
Imports Me
Suggests Me MLInterfaces

Package Downloads

Package Source keggorthology_2.17.0.tar.gz
Windows Binary keggorthology_2.17.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) keggorthology_2.17.0.tgz
Mac OS X 10.9 (Mavericks)
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