AGDEX

DOI: 10.18129/B9.bioc.AGDEX    

Agreement of Differential Expression Analysis

Bioconductor version: Release (3.8)

A tool to evaluate agreement of differential expression for cross-species genomics

Author: Stan Pounds <stanley.pounds at stjude.org>; Cuilan Lani Gao <cuilan.gao at stjude.org>

Maintainer: Cuilan lani Gao <cuilan.gao at stjude.org>

Citation (from within R, enter citation("AGDEX")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("AGDEX", version = "3.8")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AGDEX")

 

PDF R Script AGDEX.pdf
PDF   Reference Manual

Details

biocViews GeneExpression, Genetics, Microarray, Software
Version 1.30.0
In Bioconductor since BioC 2.9 (R-2.14) (7 years)
License GPL Version 2 or later
Depends R (>= 2.10), Biobase, GSEABase
Imports stats
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package AGDEX_1.30.0.tar.gz
Windows Binary AGDEX_1.30.0.zip
Mac OS X 10.11 (El Capitan) AGDEX_1.30.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/AGDEX
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/AGDEX
Package Short Url http://bioconductor.org/packages/AGDEX/
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