To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm8")

In most cases, you don't need to download the package archive at all.

BSgenome.Mmusculus.UCSC.mm8

Full genome sequences for Mus musculus (UCSC version mm8)

Bioconductor version: Release (3.0)

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm8, Feb. 2006) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm8")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm8")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Mus_musculus
Version 1.4.0
License Artistic-2.0
Depends BSgenome(>= 1.33.5)
Imports BSgenome
Suggests GenomicFeatures
System Requirements
URL
Depends On Me BSgenome.Mmusculus.UCSC.mm8.masked
Imports Me BSgenome.Mmusculus.UCSC.mm8.masked
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Mmusculus.UCSC.mm8_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center