flowStats
This is the development version of flowStats; for the stable release version, see flowStats.
Statistical methods for the analysis of flow cytometry data
Bioconductor version: Development (3.20)
Methods and functionality to analyse flow data that is beyond the basic infrastructure provided by the flowCore package.
Author: Florian Hahne, Nishant Gopalakrishnan, Alireza Hadj Khodabakhshi, Chao-Jen Wong, Kyongryun Lee
Maintainer: Greg Finak <greg at ozette.com>, Mike Jiang <mike at ozette.com>
citation("flowStats")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("flowStats")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowStats")
flowStats Overview | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | CellBasedAssays, FlowCytometry, ImmunoOncology, Software |
Version | 4.17.0 |
In Bioconductor since | BioC 2.4 (R-2.9) (15.5 years) |
License | Artistic-2.0 |
Depends | R (>= 3.0.2) |
Imports | BiocGenerics, MASS, flowCore(>= 1.99.6), flowWorkspace, ncdfFlow(>= 2.19.5), flowViz, fda (>= 2.2.6), Biobase, methods, grDevices, graphics, stats, cluster, utils, KernSmooth, lattice, ks, RColorBrewer, rrcov, corpcor, mnormt, clue |
System Requirements | |
URL | http://www.github.com/RGLab/flowStats |
Bug Reports | http://www.github.com/RGLab/flowStats/issues |
See More
Suggests | xtable, testthat, openCyto, ggcyto, ggridges |
Linking To | |
Enhances | RBGL, graph |
Depends On Me | flowVS, highthroughputassays |
Imports Me | |
Suggests Me | cydar, flowClust, flowCore, flowTime, flowViz, ggcyto, openCyto |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | flowStats_4.17.0.tar.gz |
Windows Binary | flowStats_4.17.0.zip (64-bit only) |
macOS Binary (x86_64) | flowStats_4.17.0.tgz |
macOS Binary (arm64) | flowStats_4.17.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/flowStats |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowStats |
Bioc Package Browser | https://code.bioconductor.org/browse/flowStats/ |
Package Short Url | https://bioconductor.org/packages/flowStats/ |
Package Downloads Report | Download Stats |