ncdfFlow
This is the development version of ncdfFlow; for the stable release version, see ncdfFlow.
ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.
Bioconductor version: Development (3.20)
Provides HDF5 storage based methods and functions for manipulation of flow cytometry data.
Author: Mike Jiang,Greg Finak,N. Gopalakrishnan
Maintainer: Mike Jiang <mike at ozette.com>
Citation (from within R, enter
citation("ncdfFlow")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ncdfFlow")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ncdfFlow")
Basic Functions for Flow Cytometry Data | R Script | |
Reference Manual | ||
README | Text | |
NEWS | Text | |
LICENSE | Text |
Details
biocViews | FlowCytometry, ImmunoOncology, Software |
Version | 2.51.0 |
In Bioconductor since | BioC 2.9 (R-2.14) (13 years) |
License | AGPL-3.0-only |
Depends | R (>= 2.14.0), flowCore(>= 1.51.7), methods, BH |
Imports | Biobase, BiocGenerics, flowCore, zlibbioc |
System Requirements | |
URL |
See More
Suggests | testthat, parallel, flowStats, knitr |
Linking To | cpp11, BH, Rhdf5lib |
Enhances | |
Depends On Me | ggcyto |
Imports Me | flowStats, flowWorkspace |
Suggests Me | COMPASS, cydar |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | ncdfFlow_2.51.0.tar.gz |
Windows Binary | ncdfFlow_2.51.0.zip |
macOS Binary (x86_64) | ncdfFlow_2.51.0.tgz |
macOS Binary (arm64) | ncdfFlow_2.51.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/ncdfFlow |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ncdfFlow |
Bioc Package Browser | https://code.bioconductor.org/browse/ncdfFlow/ |
Package Short Url | https://bioconductor.org/packages/ncdfFlow/ |
Package Downloads Report | Download Stats |