To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("TxDb.Hsapiens.UCSC.hg18.knownGene")

In most cases, you don't need to download the package archive at all.

TxDb.Hsapiens.UCSC.hg18.knownGene

Annotation package for TxDb object(s)

Bioconductor version: Release (3.0)

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("TxDb.Hsapiens.UCSC.hg18.knownGene")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("TxDb.Hsapiens.UCSC.hg18.knownGene")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Genetics, Homo_sapiens, TxDb
Version 3.0.0
License Artistic-2.0
Depends GenomicFeatures(>= 1.17.17)
Imports GenomicFeatures, AnnotationDbi
Suggests
System Requirements
URL
Depends On Me FDb.InfiniumMethylation.hg18
Imports Me
Suggests Me BSgenome.Hsapiens.UCSC.hg18, ChIPQC, ggtut, ind1KG, methylPipe, Rsamtools

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source TxDb.Hsapiens.UCSC.hg18.knownGene_3.0.0.tar.gz
Windows Binary TxDb.Hsapiens.UCSC.hg18.knownGene_3.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) TxDb.Hsapiens.UCSC.hg18.knownGene_3.0.0.tgz
Mac OS X 10.9 (Mavericks) TxDb.Hsapiens.UCSC.hg18.knownGene_3.0.0.tgz
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