To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("TxDb.Mmusculus.UCSC.mm9.knownGene")

In most cases, you don't need to download the package archive at all.

TxDb.Mmusculus.UCSC.mm9.knownGene

Annotation package for TranscriptDb object(s)

Bioconductor version: Release (2.14)

Exposes an annotation databases generated from UCSC by exposing these as TranscriptDb objects

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("TxDb.Mmusculus.UCSC.mm9.knownGene")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("TxDb.Mmusculus.UCSC.mm9.knownGene")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TxDb.Mmusculus.UCSC.mm9.knownGene")

 

PDF   Reference Manual

Details

biocViews AnnotationData, Genetics, Mus_musculus, TranscriptDb
Version 2.14.0
License Artistic-2.0
Depends GenomicFeatures(>= 1.15.11)
Imports GenomicFeatures, AnnotationDbi
Suggests
System Requirements
URL
Depends On Me
Imports Me CompGO
Suggests Me ChIPQC, chipseq, ggbio

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source TxDb.Mmusculus.UCSC.mm9.knownGene_2.14.0.tar.gz
Windows Binary TxDb.Mmusculus.UCSC.mm9.knownGene_2.14.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) TxDb.Mmusculus.UCSC.mm9.knownGene_2.14.0.tgz
Mac OS X 10.9 (Mavericks) TxDb.Mmusculus.UCSC.mm9.knownGene_2.14.0.tgz
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