geneplotter

Graphics related functions for Bioconductor

Bioconductor version: Development (3.0)

Functions for plotting genomic data

Author: R. Gentleman, Biocore

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("geneplotter")

To cite this package in a publication, start R and enter:

    citation("geneplotter")

Documentation

PDF R Script How to assemble a chromLocation object
PDF R Script Visualization of Microarray Data
PDF   Reference Manual
Text   README
Text   NEWS

Details

biocViews Software, Visualization
Version 1.43.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License Artistic-2.0
Depends R (>= 2.10), methods, Biobase, BiocGenerics, lattice, annotate
Imports AnnotationDbi, graphics, grDevices, grid, RColorBrewer, stats, utils
Suggests Rgraphviz, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db
System Requirements
URL
Depends On Me HD2013SGI, Hiiragi2013, HMMcopy
Imports Me biocGraph, DESeq, DESeq2, DEXSeq, flowQ, IsoGeneGUI, MethylSeekR, RNAinteract, RNAither
Suggests Me AgiMicroRna, BiocCaseStudies, biocGraph, Category, GOstats

Package Downloads

Package Source geneplotter_1.43.0.tar.gz
Windows Binary geneplotter_1.43.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) geneplotter_1.43.0.tgz
Mac OS X 10.9 (Mavericks)
Package Downloads Report Download Stats

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