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This is the development version of annotate; for the stable release version, see annotate.

Annotation for microarrays

Bioconductor version: Development (3.4)

Using R enviroments for annotation.

Author: R. Gentleman

Maintainer: Bioconductor Package Maintainer <maintainer at>

Citation (from within R, enter citation("annotate")):


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PDF annotate.pdf
PDF chromLoc.pdf
PDF GOusage.pdf
PDF prettyOutput.pdf
PDF query.pdf
PDF useDataPkgs.pdf
PDF useHomology.pdf
PDF useProbeInfo.pdf
PDF   Reference Manual
Text   NEWS


biocViews Annotation, GO, Pathways, Software
Version 1.51.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 11 years)
License Artistic-2.0
Depends R (>= 2.10), AnnotationDbi(>= 1.27.5), XML
Imports Biobase, DBI, xtable, graphics, utils, stats, methods, BiocGenerics(>= 0.13.8)
Suggests hgu95av2.db, genefilter, Biostrings(>= 2.25.10), rae230a.db, rae230aprobe, tkWidgets, GO.db,,, hom.Hs.inp.db, humanCHRLOC, Rgraphviz, RUnit
Depends On Me ChromHeatMap, GeneAnswers, geneplotter, GOSim, GSEABase, idiogram, macat, MGFM, MineICA, MLInterfaces, PCpheno, phenoTest, PREDA, RpsiXML, ScISI, SemDist
Imports Me CAFE, Category, categoryCompare, codelink, DOQTL, facopy, gCMAP, gCMAPWeb, GeneAnswers, genefilter, GlobalAncova, globaltest, GOstats, lumi, methyAnalysis, methylumi, mvGST, phenoTest, qpgraph, ReportingTools, ScISI, splicegear, systemPipeR, tigre
Suggests Me BiocCaseStudies, BiocGenerics, biomaRt, GenomicRanges, GlobalAncova, GOstats, GSAR, GSEAlm, maigesPack, metagenomeSeq, MLP, oneChannelGUI, puma, RnBeads, siggenes, SummarizedExperiment
Build Report  

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Package Source annotate_1.51.0.tar.gz
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