To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BiocGenerics")

In most cases, you don't need to download the package archive at all.

BiocGenerics

 

   

This is the development version of BiocGenerics; for the stable release version, see BiocGenerics.

S4 generic functions for Bioconductor

Bioconductor version: Development (3.4)

S4 generic functions needed by many Bioconductor packages.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BiocGenerics")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BiocGenerics")

Documentation

PDF   Reference Manual

Details

biocViews Infrastructure, Software
Version 0.19.2
In Bioconductor since BioC 2.10 (R-2.15) (4.5 years)
License Artistic-2.0
Depends methods, utils, graphics, stats, parallel
Imports methods, utils, graphics, stats, parallel
LinkingTo
Suggests Biobase, S4Vectors, IRanges, GenomicRanges, AnnotationDbi, oligoClasses, oligo, affyPLM, flowClust, affy, DESeq2, MSnbase, annotate, RUnit
SystemRequirements
Enhances
URL
Depends On Me ACME, affy, affyPLM, altcdfenvs, AnnotationDbi, AnnotationForge, AnnotationHub, ASpli, beadarray, bioassayR, Biobase, Biostrings, BSgenome, bsseq, Cardinal, Category, categoryCompare, ChAMPdata, chipseq, ChIPseqR, ChromHeatMap, cleanUpdTSeq, codelink, consensusSeekeR, copynumber, CopyNumber450k, CRISPRseek, cummeRbund, DESeq, dexus, ensembldb, ensemblVEP, ExperimentHub, ExperimentHubData, FEM, flowQ, geneplotter, GenomeInfoDb, genomeIntervals, GenomicAlignments, GenomicFeatures, GenomicFiles, GenomicRanges, Genominator, genoset, ggbio, girafe, graph, graphite, GSEABase, GUIDEseq, HDF5Array, htSeqTools, interactiveDisplay, interactiveDisplayBase, IRanges, MBASED, MeSHDbi, meshr, methyAnalysis, MineICA, minfi, MLInterfaces, MotifDb, MotIV, MSnbase, multtest, oligo, OrganismDbi, pandaR, Pbase, PICS, plethy, PSICQUIC, PWMEnrich, RareVariantVis, REDseq, RNAprobR, RnBeads, RPA, rsbml, S4Vectors, scsR, shinyMethyl, ShortRead, simpleaffy, simulatorZ, soGGi, TEQC, tigre, topGO, UNDO, UniProt.ws, VanillaICE, VariantAnnotation, VariantFiltering, xcms, XVector
Imports Me affyPLM, AllelicImbalance, AneuFinder, annmap, annotate, AnnotationDbi, AnnotationHubData, ArrayExpressHTS, bamsignals, biocGraph, Biostrings, biosvd, biovizBase, BiSeq, blima, BrowserViz, BrowserVizDemo, BSgenome, BubbleTree, bumphunter, casper, cgdv17, cghMCR, ChemmineOB, ChIPComp, chipenrich.data, ChIPpeakAnno, ChIPQC, ChIPseeker, chipseq, cn.mops, CNEr, CNPBayes, cobindR, compEpiTools, crlmm, crossmeta, csaw, cummeRbund, curatedCRCData, curatedOvarianData, ddCt, DESeq2, destiny, DEXSeq, diffHic, DirichletMultinomial, DOQTL, DRIMSeq, DrugVsDisease, easyRNASeq, EBImage, EDASeq, eiR, eisa, epigenomix, epivizrStandalone, erma, FamAgg, fastseg, ffpe, FindMyFriends, flowBin, flowClust, flowCore, flowFP, flowQ, FlowSOM, flowStats, flowWorkspace, fmcsR, frma, FunciSNP, gCMAPWeb, genbankr, GenomeInfoDb, GenomicAlignments, GenomicInteractions, GenomicTuples, genotypeeval, GenVisR, GGBase, GGtools, goseq, GOTHiC, gQTLBase, gQTLstats, GSVA, Gviz, gwascat, hiReadsProcessor, hopach, HTSeqGenie, IHW, IHWpaper, INSPEcT, intansv, InteractionSet, IONiseR, isomiRs, IVAS, JunctionSeq, KCsmart, KEGGandMetacoreDzPathwaysGEO, KEGGdzPathwaysGEO, LOLA, LVSmiRNA, M3D, MEAL, metaMS, MethylAid, methylPipe, methylumi, MinimumDistance, MiRaGE, mogsa, monocle, motifbreakR, msa, MultiAssayExperiment, MultiDataSet, mzR, NarrowPeaks, ncdfFlow, npGSEA, nucleR, oligoClasses, parglms, pbcmc, pcaMethods, pdInfoBuilder, phyloseq, piano, PING, plrs, podkat, prada, ProCoNA, profileScoreDist, pRoloc, pwOmics, qsea, QuasR, R3CPET, R453Plus1Toolbox, RCyjs, recoup, REDseq, RefNet, ReportingTools, RGalaxy, RGSEA, RiboProfiling, Ringo, roar, Rqc, rqubic, Rsamtools, rsbml, rtracklayer, scater, scran, SGSeq, simpleaffy, SLGI, SNPhood, snpStats, spliceSites, SplicingGraphs, sscu, STAN, Streamer, SummarizedExperiment, systemPipeR, systemPipeRdata, TarSeqQC, TCGAbiolinks, TFBSTools, transcriptR, TransView, triform, TSSi, unifiedWMWqPCR, VariantTools, wavClusteR, XDE, XVector
Suggests Me acde, AIMS, ArrayTV, ASSET, baySeq, bigmemoryExtras, BiocCheck, BiocInstaller, BiocParallel, BiocStyle, biocViews, biosigner, BiRewire, CAFE, CAMERA, CAnD, CausalR, ccrepe, CellNOptR, CexoR, ChIPXpress, CHRONOS, CINdex, clipper, clonotypeR, clustComp, CNORfeeder, CNORfuzzy, CNVPanelizer, coMET, ConnectivityMap, cosmiq, COSNet, cpvSNP, cytofkit, DAPAR, DBChIP, DEGreport, DMRcaller, DMRcate, ENCODExplorer, ENmix, FGNet, flowCL, flowQB, FlowRepositoryR, focalCall, gCMAP, gdsfmt, GEM, GENE.E, GeneNetworkBuilder, GeneOverlap, geneplast, geneRxCluster, GENESIS, geNetClassifier, genomation, GEOquery, GMRP, GOstats, GraphPAC, GreyListChIP, grndata, GWASTools, h5vc, Harman, HarmanData, hiAnnotator, hierGWAS, hypergraph, iCARE, iClusterPlus, illuminaio, InPAS, INPower, kebabs, KEGGREST, ldblock, mAPKL, massiR, MatrixRider, MBttest, mdgsa, Mergeomics, Metab, metagene, metagenomeSeq, metaseqR, MetCirc, miRcomp, mirIntegrator, miRLAB, Mirsynergy, motifStack, MSnID, multiClust, MultiMed, netbenchmark, netbiov, NetSAM, nondetects, nucleoSim, OncoScore, PAA, Path2PPI, PathNet, pathview, pepXMLTab, PGA, PhenStat, Prize, proBAMr, proteoQC, PureCN, qpgraph, quantro, QuartPAC, RBGL, rBiopaxParser, Rcade, rcellminer, rCGH, Rcpi, RGraph2js, Rgraphviz, rgsepd, riboSeqR, ROntoTools, ropls, RTN, rTRM, sangerseqR, SANTA, sapFinder, segmentSeq, SeqArray, seqPattern, seqTools, SeqVarTools, SICtools, sigsquared, SIMAT, similaRpeak, SNPRelate, SpacePAC, specL, STATegRa, STRINGdb, TCC, TIN, ToPASeq, trackViewer, traseR, TRONCO, Uniquorn
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BiocGenerics_0.19.2.tar.gz
Windows Binary BiocGenerics_0.19.2.zip
Mac OS X 10.9 (Mavericks) BiocGenerics_0.19.2.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/BiocGenerics
Package Short Url http://bioconductor.org/packages/BiocGenerics/
Package Downloads Report Download Stats

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