Full genome sequences for Homo sapiens (UCSC version hg19)

Bioconductor version: Release (2.14)

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg19, Feb. 2009) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at>

To install this package, start R and enter:


Citation (from within R, enter citation("BSgenome.Hsapiens.UCSC.hg19")):


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biocViews AnnotationData, BSgenome, Genetics, Homo_sapiens
Version 1.3.1000
License Artistic-2.0
Depends BSgenome(>= 1.32.0)
Imports BSgenome
System Requirements
Depends On Me BSgenome.Hsapiens.UCSC.hg19.masked, chimera, FDb.InfiniumMethylation.hg19, motifRG
Imports Me BSgenome.Hsapiens.UCSC.hg19.masked, VariantFiltering
Suggests Me ArrayTV, Basic4Cseq, biovizBase, BSgenome, CRISPRseek, customProDB, FDb.FANTOM4.promoters.hg19, FDb.UCSC.snp135common.hg19, FDb.UCSC.snp137common.hg19, GenomicAlignments, GenomicFeatures, GenomicRanges, ggbio, gmapR, Gviz, h5vc, MEDIPS, MiRaGE, oneChannelGUI, R453Plus1Toolbox, Rsamtools, RSVSim, rtracklayer, SNPlocs.Hsapiens.dbSNP.20100427, SNPlocs.Hsapiens.dbSNP.20101109, SNPlocs.Hsapiens.dbSNP.20110815, SNPlocs.Hsapiens.dbSNP.20111119, SNPlocs.Hsapiens.dbSNP.20120608, SomaticSignatures, spliceR, VariantAnnotation

Package Downloads

Package Source BSgenome.Hsapiens.UCSC.hg19_1.3.1000.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Hsapiens.UCSC.hg19_1.3.99.tgz
Mac OS X 10.9 (Mavericks) BSgenome.Hsapiens.UCSC.hg19_1.3.99.tgz
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